Scientific program
General Conference Schedule
July, 21 | July, 22 | July, 23 | July, 24 | July, 25 | |
Morning | Genomics of eukaryotes | Metagenomics |
NGS and data analysis Poster Session |
Medical genomics Closing ceremony |
|
Afternoon |
Opening ceremony |
Genomics of bacteria and viruses | |||
Cultural events | Welcome party | ZOO | Ballet |
Banquet |
Preliminary list of lectures:
Genomics of eukaryotes
-
Igor Grigoryev (DOE Joint Genome Institute, USA)
Fungal genomics for Energy and Environment -
Konstantin Krutovsky (Georg-August-University of Göttingen, Germany)
Targeted and complete genome de novo sequencing in conifer trees with giant and complex genomes -
Matthias Meyer (Max Planck Institute for Evolutionary Anthropology, Germany)
Archaic Genomes -
Ancha Baranova (George Mason University, USA)
We know it all: what is next? Protein-centric analysis of publicly available PPI data for functionally diverse KCTD family as an example -
Alexandr Graphodatsky (Institute for Molecular and Cellular Bbiology SB RAS, Novosibirsk)
Chromosomal organization of mammalian genomes -
Anna Druzhkova (Institute for Molecular and Cellular Biology SB RAS, Novosibirsk)
Analysis of equid fossil DNA from the Denisova cave using throughput sequencing platforms -
Alexey Moskalev (Institute of Biology of the Komi Science Centre of the Ural, Syktyvkar)
Transcriptome сhange of adult Drosophila melanogaster after exposure to gamma-radiation, 2,3,7,8-tetrachlorodibenzo-p-dioxin, toluene and formaldehyde -
Fatima Smagulova (European University of Brittany, France)
Genome wide mapping of meiotic recombination hotspots in mice -
Ekaterina Loseva (Institute of Сhemical Biology and Fundamental Medicine of SB RAS, Novosibirsk)
Characterization of genomic DNA fragments generated during apoptosis -
Vladimir Trifonov (Institute for Molecular and Cellular Biology SB RAS, Novosibirsk)
The study of reptile sex chromosome evolution by high-throughput sequencing of chromosome specific libraries -
Victoria Mironova (Institute of Cytology and Genetics, Novosibirsk)
Ауксин-зависимые изменения транскриптома корней Arabidopsis thaliana L.
Metagenomics
-
Ludmila Chistoserdova (University of Washington, USA)
Using Metagenomics for understanding functionality of complex microbial communities -
Evgeny Andronov (All-Russia Research Institute for Agricultural Microbiology, St.Petersburg)
New approaches for analyses of soil microbiome -
AnnaPopenko (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
Special traits of russian gut microbiome: functional analysis and cross-national comparative study -
Alexandr Zelenin (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
Структура бактериального сообщества пищеварительного тракта криптобиотической хирономиды Polypedilum vanderplanki с позиции метагеномного анализа. -
Vitaly Kadnikov (Center "Bioengineering" RAS, Moscow)
Метагеномный анализ микробного сообщества глубинного подземного термального местообитания в Западной Сибири.
Genomics of bacteria and viruses
-
Nikolay Ravin (Center "Bioengineering" RAS, Moscow)
Sequencing of genomes of extremophilic microorganisms representing new phylogenetic lineages -
Konstantin Miroshnikov (Institute of bioorganic chemistry RAS, Moscow)
Bacteriophage genomics: Prospects of the NexGen sequencing approach -
Olga Averina (Vavilov Institute of General Genetics RAS, Moscow)
Complete genome sequence of Bifidobacterium longum GT15: comparative genomic analysis, global regulatory genes, unique genes -
Alexandr Manolov (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
De Novo assembly and comparative analysis of the genome of the bacteria P. stutzeri KOS6 isolated from hydrocarbon sludge -
Ivan Bodoev (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
Секвенирование и de-novo сборка геномной ДНК штамма Neisseria gonorrhoeae k51.05 -
Vladislav Babenko (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
A combination of different approaches for improve sequencing assembly bacterial genome,for example Spiroplasma melliferum
NGS and data analysis
-
Alla Lapidus (Dobzhansky Center for Genome Bioinformatics, SPbU , Russia)
Genome assembly and finishing - why hight quality references are needed -
Marta Matvienko (CLC Bio, USA)
Sequencing sample prep and data assembly methods: 15 years of accelerated evolution -
Marie-Theres Gansauge (Max Planck Institute for Evolutionary Anthropology, Germany)
Methods for ancient DNA sequencing -
Andrey Przhibelskiy (St Petersburg Academic University, St.Petersburg)
Genome draft assembly algorithms: from the very beginning till present-day problems -
Elena Kostryukova (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
Effects of sample-preparation stage on results of metagenomic analysis after shotgun sequencing -
Igor Morozov (Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk)
The importance of library fragments size for the quality of emulsion PCR dependent MPSS data -
Dmitry Shtokalo (A.P.Ershov Institute of Informatics Systems SB RAS, Novosibirsk)
Very long intergenic non-coding RNA (vlincRNA) discovery in NGS data -
Olga Golosova (NCIT "UNIPRO", Novosibirsk)
Analysis of Next-Generation Sequencing Data with UGENE -
Fedor Kolpakov (Design Technological Institute of Digital Techniques of SB RAS, Novosibirsk)
BioUML – software platform for analysis of next generation sequencing data using collaborative and reproducible research
Medical genomics
-
Vadim Stepanov (Research Institute of Medical Genetics SB RAMS, Tomsk)
High-throughput SNP genotyping: decanalization of immune response during human dispersal -
Alexandr Tyacht (Research Institute of Physico-Chemical Medicine FMBA, Moscow)
Temporal evolution of gut microbiota composition during cancer treatment in pediatric patients as identitified by metagenomic analysis -
Dmitry Baryakin (Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk)
Small non-coding RNAs of human blood plasma -
Anna Savelyeva (Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk)
Ribonucleic acid composition of extracellular vesicles from healthy donor's blood -
Ekaterina Trifonova (Research Institute of Medical Genetics SB RAMS, Tomsk)
Identification of the pathophysiological mechanisms of preeclampsia by genome-wide expression analysis -
Maria Nazarenko (Research Institute of Medical Genetics SB RAMS, Tomsk)
Microarray analysis of the DNA methylation profile of vascular tissues and whole blood from patients with atherosclerosis -
Olga Saik (Institute of Cytology and Genetics of SB RAS, Novosibirsk)
Analysis of RNASeq digital gene expression for expanding disease “associome” reconstructed based on information stored in databases